Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876884.1_cds_XP_016436296.1_32171
CDS Infomation

[gene=LOC107762452] [db_xref=GeneID:107762452] [protein=carboxyl-terminal-processing peptidase 2, chloroplastic-like] [protein_id=XP_016436296.1] [location=complement(join(985..1110,1206..1299,1381..1478,1922..2030,2153..2194,2269..2344,2852..2970,3266..3334,3496..3704,3811..3893,4473..4622,4726..5098,6239..6340))] [gbkey=CDS]
Sequence

ATGGAAGCTCTTCTGGGAAGCTCTCATTCTCCTTCAGCCTCTGTATCTCCTTCGTTTATC
ATCACTAGCAGCTACACAAGAAACCCCACTATTGCTTTTAAGGTGCTTTCGTGGAATTCT
TTGTACAGTGGAAGTAATAACTCTCGACTATATCCTCCTATATTGTGTCTTAAAAAGAGT
GGCAATGACAACTCTGGAAGTTGCTCTCCTTTATGCTACATTGAGCAAATGTGCAGAAAC
AGAATGTTTTCTCAGCCAAACTGGAGGCATAGCAAAATATTCATTGATAAGCAACGTTTG
CTGGTTATACAAAATGGCTTACCTTTTTTACCAAGAAAATTCAAAACCAGTTTCCGCAAA
ACAGTAAAGCATTCAGAAATATTTAGGAATATAGTACCTGATATATTTGTTCGGTCCTGC
ATTGGACTAATGCTGGTTATGGCAGTTAATGCTGCTGTTGTGAAAGCTCCTTCTTTTGCT
CTCACTGAAGAAAATTTGCTTTTCTTGGAGGCATGGAGAACAATTGACCGTGCATATATT
GACAAGACCTTCAATGGTCAAAGTTGGTTTAGGTACAGAGAAGATGCACTACGAAATGAA
CCAATGAACACACGGCAGGAAACGTATGCAGCAATAAAAAAGATGATTGCCACTCTGGAT
GACCCTTTCACCCGTTTTCTGGAGCCTGAAAAGTTTAAAAGTTTGCGGTCAGGAACTCAA
AATGCGCTTACTGGAGTAGGGTTGTCAATTGGCTATCCAACAGGAAAAACTGAATCAGCT
CCTGGACTGGTCGTCGTCTCCGCTTCTCCAGGAGGTCCTGCAAATAGGGCTGGCATCTCA
TCTGGTGATATTATCCTAAAAATTGACAGTACCAGCACAGAAAACATGGGTATATATGAT
GCAGCAGAACGGTTACAAGGACCTGAAGGAAGTGGTGTGGAACTAACTGTACATCGTGGA
TCTGAGACAAGGAACCTGCAATTGATACGGGAGAAAGTTTCGCTTAATCCTGTAAAATCA
AGAATCTGCAAGCTGCCCACTGGAGGAGATGATGCTCCACAGATTGGATACATCAAACTA
TCAACATTCAACCAAAATGCTTCTGGTGCTGTAAGAGAAGCGATCGAAGCCTTAAGGAAA
AACAATGTTAATGCCTTTGTGTTGGACCTTCGGGATAATAGTGGTGGTCTCTTCCCAGAA
GGAGTTGAGATAGCAAAAATTTGGTTAAACAAGGGTGTGATTGTATACATTTGCGATAGC
CGTGGTGTTCGAGATATTTATGACACGGATGGGAGCAATGTGGTAGCTGCTTCAGAACCC
CTAGCAGTGCTGGTAAACAAAGGGACTGCAAGCGCAAGTGAGATTTTAGCAGGTGCTCTG
AAAGATAATAAGCGAGCCCAGCTTTTTGGTGAACCAACATATGGCAAGGGTAAAATCCAG
TCAGTTTTCCAGCTATCAGATGGCTCTGGCTTGGCTGTTACAGTTGCTCGGTATGAAACT
CCTGCTCACAACGATATAGACAAGGTTGGTGTAATTCCGGACCATCCTTTGCCAGCTTCA
TTCCCAAAAGACGACGAGAGCTTCTGTAACTGCCTTCTAAATCCTGCCTCTGCTTGCCAC
CTAAACAGAGTCGAGCTATTCTCGAAATAA

Peptide Sequence

PEP ID

XP_016436296.1
PEP Infomation

PREDICTED: carboxyl-terminal-processing peptidase 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MEALLGSSHSPSASVSPSFIITSSYTRNPTIAFKVLSWNSLYSGSNNSRLYPPILCLKKS
GNDNSGSCSPLCYIEQMCRNRMFSQPNWRHSKIFIDKQRLLVIQNGLPFLPRKFKTSFRK
TVKHSEIFRNIVPDIFVRSCIGLMLVMAVNAAVVKAPSFALTEENLLFLEAWRTIDRAYI
DKTFNGQSWFRYREDALRNEPMNTRQETYAAIKKMIATLDDPFTRFLEPEKFKSLRSGTQ
NALTGVGLSIGYPTGKTESAPGLVVVSASPGGPANRAGISSGDIILKIDSTSTENMGIYD
AAERLQGPEGSGVELTVHRGSETRNLQLIREKVSLNPVKSRICKLPTGGDDAPQIGYIKL
STFNQNASGAVREAIEALRKNNVNAFVLDLRDNSGGLFPEGVEIAKIWLNKGVIVYICDS
RGVRDIYDTDGSNVVAASEPLAVLVNKGTASASEILAGALKDNKRAQLFGEPTYGKGKIQ
SVFQLSDGSGLAVTVARYETPAHNDIDKVGVIPDHPLPASFPKDDESFCNCLLNPASACH
LNRVELFSK

Transcript Sequence

Gene sequence data has not been registered.